Gnomic API

Genotype

class gnomic.Genotype(changes, parent=None)

classmethod is_valid(gnomic_string, **kwargs)

Tests whether a gnomic genotype definition can be parsed.

Features

class gnomic.Feature(name=None, type=None, accession=None, organism=None, variant=None)

-Feature(“foo”) Feature(“site”) >> Feature(“insertion”)

class gnomic.Plasmid(name, annotations=())

class gnomic.Fusion(*annotations)